augur.util_support.metadata_file module¶
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class
augur.util_support.metadata_file.
MetadataFile
(fname, query=None, as_data_frame=False)¶ Bases:
object
Represents a CSV or TSV file containing metadata
The file must contain exactly one of a column named strain or name, which is used to match metadata with samples.
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check_metadata_duplicates
()¶
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property
columns
¶
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find_key_type
()¶
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property
metadata
¶ Return list of dicts representing the metadata in the file.
If a query was supplied, apply it.
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parse_file
¶
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read
()¶
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