augur.frequencies module¶
infer frequencies of mutations or clades
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augur.frequencies.
format_frequencies
(freq)¶
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augur.frequencies.
numeric_date
(date)¶ Converts the given date string to a
float
. date may be given as a number (a float) with year as the integer part, or in the YYYY-MM-DD (ISO 8601) syntax. >>> numeric_date(“2020.42”) 2020.42 >>> numeric_date(“2020-06-04”) 2020.42486…
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augur.frequencies.
register_arguments
(parser)¶
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augur.frequencies.
run
(args)¶